from ecosystems to biomolecules

University of Pennsylvania, Philadelphia, PA, USA
September 29 - 0ctober 1, 2002


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Arabidopsis thaliana

Ni-hyperaccumulator Alyssum lesbiacum

Arabidopsis halleri growing on mine waste

Cloning of an ABC transporter gene involved in cadmium tolerance in the unicellular green alga Chlamydomonas reinhardtii
Marc Hanikenne1, Caroline Nieberding1, René F. Matagne1, Madeline C.S. Wu2 and Roland Loppes1
1Genetics of Microorganisms, B22, University of Liège, B4000 Liège, Belgium
2Department of Biology, Hong Kong University of Science and Technology, Hong Kong, China

Insertional mutagenesis has been used to induce Chlamydomonas mutants hypersensitive to heavy metals. Out of 28 mutants isolated, six were only sensitive to cadmium while five were only sensitive to copper. The seventeen other mutants were pleiotropic and displayed sensitivity to several (2 to 7) of the following agents: cadmium, copper, lead, hydrogen peroxide, tert-butylhydroperoxide, paraquat, UVC and light. Five mutations determining Cd-hypersensitivity were found to be allelic (CDS1 gene). One of the cds1 mutants was submitted to atomic absorption spectroscopy and gel filtration chromatography analyses: it accumulated cadmium at the same rate as the wild type but produced higher amounts of phytochelatins. Cloning of the CDS1 gene was undertaken using plasmid rescue in E. coli and screening of a Chlamydomonas BAC library with the rescued probe. A BAC clone and two derived subclones complementing the cds1 mutation were isolated. A single gene sharing similarities with ABC transporters was identified in these subclones.
Supported by FRFC grant 2.4539.98.

Metal-specificity of the histidine response in hyperaccumulator plants
F. A. Harper1, E. Gratia1, K. I. Köhl1, A. J. M. Baker2 and J. A. C. Smith1
1Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK
2School of Botany, The University of Melbourne, Victoria 3010, Australia

As a response to exposure to Ni, hyperaccumulator plants in the genus Alyssum export increased amounts of the amino acid histidine from the roots to the shoot in the xylem. Previous experimental evidence has implicated this histidine response in both tolerance to Ni at the cellular level (through coordination of the metal ion) and generation of the hyperaccumulator phenotype (by facilitating Ni translocation to the shoot). In the present work, we have investigated whether the histidine response occurs in other taxa of Ni-hyperaccumulating plants and whether other metals can also generate this response. To examine the relationship between metal exposure and histidine production, xylem sap was collected as root-pressure exudate from plants exposed to a range of metal concentrations. Exposure to Ni increased xylem histidine concentrations in all species of Ni-hyperaccumulator plants tested, which included five species of Brassicaceae (Thlaspi caerulescens, T. cariense, T. goesingense, T. montanum var. siskiyouense and Streptanthus polygaloides) and one species of Asteraceae (Berkheya coddii). There was also a significant increase in xylem histidine in response to Co in T. caerulescens, as previously noted for Alyssum spp. In contrast, there was no response of xylem histidine to Zn in the Zn-hyperaccumulators Thlaspi caerulescens or Arabidopsis halleri, or to Mn in the Mn-hyperaccumulator Grevillea exul var. exul (Proteaceae). Thus, the histidine response appears to be widespread in Ni-hyperaccumulator plants, but restricted in its metal specificity to Ni and Co.

Characterization of zinc tolerance genes in the zinc/cadmium hyperaccumulator Thlaspi caerulescens
Melinda Klein, Nicole Pence and Leon Kochian
U. S. Plant, Soil and Nutrition Laboratory, Cornell University, Ithaca, NY 14853, USA

Thlaspi caerulescens, a heavy metal hyperaccumulating plant species, accumulates up to 30,000 ppm zinc in the above ground biomass without exhibiting toxicity symptoms. Previous work in our lab has shown that altered regulation of micronutrient uptake, transport and sequestration in this species plays a key role in the hyperaccumulation phenotype. Thus, T. caerulescens is an excellent model system to study mechanisms of micronutrient homeostasis and extreme metal tolerance. Additionally, as a member of the Brassicaceae, the rich genomic resources of Arabidopsis thaliana are readily accessible for comparative studies. For these reasons, our lab is examining the mechanisms of zinc uptake and tolerance in T. caerulescens to further provide insights into plant mineral nutrition and the use of plants in phytoremediation efforts. While previous research has shown increased uptake and transport of zinc from the roots to foliar tissue in T. caerulescens relative to non-accumulating species, the mechanism of sequestration and tolerance of these elevated metal concentrations within the plant are still unknown. We are examining the molecular basis for this metal tolerance through a screen based on functional complementation in yeast. Yeast were transformed with a T. caerulescens expression library, screened for growth on high levels of zinc, and putative zinc tolerance genes were isolated and identified. From the genes identified in the screen, we have narrowed our focus to four putative zinc tolerance genes including a 14-3-3 protein, a putative protein kinase, a vesicle related protein and a putative DNA binding protein. Current research efforts are focused on characterizing their activity both in T. caerulescens and A. thaliana.
Supported by NSF Grant # IBN-0129844

Analysis of accumulation and distribution of heavy metals in ecosystems of the Eastern Carpathian Mountains (Ukraine)
V. I. Kozlovskyy and O. Maryskevych
Institute of Ecology of Carpathian Mountains of National Academy of Sciences of Ukraine, 4 Kozel'nyc'ka Str., L'viv, 79026, Ukraine

Contamination of soil, surface water and groundwater with heavy metals and radionuclides poses an increasing environmental problem in Eastern Europe and worldwide. In the present study we are analyzing the dynamics of contamination with heavy metals of the Eastern Carpathian Mountains (Chornohora massif, Ukraine), territories of which are the least subjected to anthropogenic disturbance. Evaluation of the present status of the pollution of the Chornohora massif is based on study of the elemental composition and concentration of heavy metals in the topsoil and plant nappe. Assessment of the atmospheric pollution of the Chornohora massif is based on the analysis of thaw snow, mosses and lichens. The values for plant nappe are compared to those obtained from herbarium samples that were collected from the same territories at the beginning of the 20th century.
We demonstrate that all from more than 30 dominant species analyzed have the increased ability to extract and to accumulate heavy metals. As determined by atomic adsorption spectroscopy, amounts of Pb and Cd in the topsoil are from 2 to 3 times higher in comparison to Clark values. Surprisingly, amounts of these metals in tissues of land growing plants are over an order of magnitude higher. Concentrations of Fe and Zn in the topsoil are lower by at least 2 to 5 times and of Cu and Mn by 5 and 20 times, repectively, in comparison to Clark values. Nevertheless, the gross amount of Cu, Zn, Mn and Fe in the plant nappe is higher but does not exceed Clark values for the land growing plants. The concentrations of elements in thaw snow do not go above background values, typical for the Earth zones with the least anthropogenic influence. However, the concentration of heavy metals in mosses and lichens are higher then the average values typical for European ecosystems. Comparison of the herbarium samples of mosses with freshly collected plants establishes that there are no significant time dependent trends in the composition and amount of heavy metals. The increased ability of plants to accumulate heavy metals will be discussed in relation to chemical characteristics of the soil of the Chornohora massif.

Molecular aspects of the adaptive zinc tolerance of the ectomycorrhizal fungus Suillus luteus
M. Lambaerts
Limburgs Universitair, Centrum Environmental Biology, Universitaire Campus, B-3590 Diepenbeek, Belgium

Zinc is an essential micronutrient for life. As a structural component of the zinc finger motifs found in many transcription factors and as a catalytic co-factor for RNA polymerase, zinc is required for gene transcription. Excess zinc, however, can be detrimental to cells. Industrial activities have led to large-scale contamination of the environment with toxic heavy metals. The further spread of these heavy metals remains a permanent and current problem. Phytostabilization and, in the future, phytoremediation can offer a solution to this problem. In this project we want to find the genes that are responsible for the zinc tolerance of an ectomycorrhizal fungus, Suillus luteus, found in a zinc-contaminated area in Lommel-Maatheide (Belgium) (Colpaert et al., 2000). Understanding the molecular mechanism used by this fungus to cope with excess Zn can help us in the phytostabilization of contaminated areas. It is already clear that metal tolerant ectomycorrhizal fungi can help host plants to survive in this situation. We want to find the genes by using a cDNA-library (constructed in the pYES2 plasmid with a galactose-promoter) of S. luteus, express this library in a zinc sensitive yeast strain (zrc1D) and screen for surviving clones on plates with high zinc concentrations. After checking the selected cDNAs in yeast by making use of the galactose promoter to switch the gene on or off, we want to transform a non-tolerant isolate of S. luteus with the tolerance-cDNA to check if the cDNA is really responsible for the zinc-tolerance. Eventually, we will perform some localization studies using a Green Fluorescent Protein (GFP) construct in yeast as well as in S. luteus.

Arabidopsis mutants exhibiting increased tolerance to arsenate
David A. Lee, Alice Chen and Julian I. Schroeder
Division of Biology, University of California, San Diego, La Jolla CA 92093-0116, USA

One proposed approach towards the remediation of arsenic is phytoremediation, the use of plants to remove and detoxify arsenic from contaminated sites. While native plants have been identified in contaminated regions with increased tolerance to toxic metals, the genetic and molecular mechanisms which confer arsenic tolerance remain largely unknown. To elucidate some of the mechanisms involved in arsenic detoxification, we developed a genetic screen using the model plant Arabidopsis thaliana. From this screen we identified a number of mutants which exhibit a significantly increased ability to grow in the presence of toxic arsenate concentrations. The strongest of these mutants, ars1, can grow on levels of arsenate which completely inhibit growth of wild type seeds. ars1 accumulates as much arsenic at the whole plant level as compared to wild type plants, suggesting that ars1 plants have an increased ability to detoxify arsenate. Phytochelatins, small metal binding peptides, are currently believed to be the primary mechanism of arsenic detoxification in plants. However, ars1 produces phytochelatin levels similar to wild type plants, and the mutation does not map to the known phytochelatin synthase genes. Furthermore, ars1 plants do not show resistance to arsenite or other toxic metals such as cadmium and chromium. These data suggest that Ars1 functions upstream of arsenite chelation by phytochelatins. Progress in the genetic, physiological and biochemical characterization of ars1 will be presented, along with models suggesting that altered arsenate biotransformation could be responsible for the ars1 phenotype.

Ectopic expression of bacterial genes encoding glutathione synthetic enzymes increases the capacity of Arabidopsis thaliana AtPCS1 transgenics for PC biosynthesis and accumulation. Analysis of tissue distribution of expression and subcellular localization of AtPCS1 fusions
Shun Liang, Olena K. Vatamaniuk, Chida Sulli, Albert Lang, Rui-Hong Li, Andrew N. Binns and Philip A. Rea
Plant Science Institute, Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA

It has been established that phytochelatin (PC) synthases, as exemplified by Arabidopsis thaliana PC synthase 1 (AtPCS1), are capable of conferring tolerance to heavy metals such as cadmium, mercury and arsenic. On this basis and from what is known of the ligand requirements and core catalytic capabilities of these synthases, many investigators have suspected that transgenic plants with markedly increased levels of AtPCS1 expression will exhibit an enhanced capacity to tolerate and accumulate heavy metals. Indeed, we (and we expect others) have shown this to be the case but have been disappointed by how moderate the increases in PC biosynthesis are despite the large increases in AtPCS1 transcript levels. Working from the hypothesis that PC biosynthesis is at least in part upstream-limited by the availability of the immediate and/or next to immediate precursors, glutathione (GSH) and g-glutamylcysteine (g-EC), of PC biosynthesis, we have attempted to overcome this limitation by engineering (stacking) the biosynthetic genes for these thiols in addition to those for PCs. Specifically we have stacked the two GSH synthetic genes concerned in series with AtPCS1 by the ectopic expression of Escherichia coli g-glutamylcysteine synthase (g-ECS) or glutathione synthase (GSH2) together with AtPCS1. The properties of the various transgenic lines generated indicate simple additive interactions between the enzymes concerned. Analyses of the AtPCS1 single transgenic lines demonstrate that overexpression of this gene increases PC biosynthesis and the capacity for Cd2+ accumulation by 1.5- and 2.0-fold, respectively. Similar analyses of the AtPCS1 and g-ECS or GSH2 double transgenic lines demonstrate an additive augmentation of PC biosynthetic capacity such that plants overexpressing either one of the ATP-dependent precursor biosynthetic enzymes accumulate 1.5-fold and 2.0-fold more PCs than AtPCS1 single transgenics and wild-type controls, respectively. Gene stacking strategies of this type may prove instrumental for some phytoremediation applications.
One of the most intriguing properties of the endogenous AtPCS1 gene is its stage-specific induction by heavy metals and high levels of expression in the basal cells of trichomes. Transgenic Arabidopsis plants expressing AtPCS1 promoter-GUS fusions exhibit intense staining of the first leaves of 5-day-old seedlings but only weak staining of the roots. However, the intensity of the staining reaction is increased significantly by exposing these, but not more mature seedlings and plants, to micromolar concentrations of Cd2+. Although GUS staining is found in a wide range of structures, including siliques, sepals and the stigmata of flowers, the bulk of the high-intensity GUS staining is associated with the basal cell pairs of trichomes. Current investigations in this area are directed at elucidating the relationship between AtPCS1 expression in structures of this type and the distribution of Cd2+ and other heavy metals in wild-type, cad1 mutant (PCS-deficient) and AtPCS1 transgenic lines by energy-dispersive X-ray microanalysis (EDXA).

Analyses of the subcellular localization of ectopically expressed AtPCS1-GFP fusions by a combination of cell fractionation and Western analysis of whole tissues and by fluorescence microscopy of isolated protoplasts reveal that although fusion protein predominantly localizes to the soluble fraction, some is also associated with the membrane fraction. The bearing this might have on processes downstream of PC biosynthesis and the properties of the Caenorhabditis elegans ortholog of AtPCS1 will be discussed.

Objective environmental risk assessment methods for genetically modified hyperaccumulators
Nicholas A. Linacre, Steven N. Whiting, Scott Angle, and Alan J.M. Baker
School of Botany, University of Melbourne, Parkville, VIC 3010, Australia

The risk of genetic pollution from genetically modified hyperaccumulators is a cause for concern. This is especially true when gene flow may occur between crop plants such as canola and closely related GM hyperaccumulators, which may transfer heavy metal accumulating genes to crop plants resulting in contamination of food crops. Such events pose human health, environmental and economic risks. Human health and environmental risks arise because gene flow from GM hyperaccumulators offers one possible pathway for heavy metals to enter the food chain. Economic risks arise from potential crop contamination leading to the rejection of the crop by trading partners or government regulators. To date most risk assessments have been subjective. This work addresses this issue by introducing a structured risk assessment paradigm.

 

Illustrations: Heavy Metal Plant cartoon by Sam Day. Arabidopsis thaliana - the model plant (Philip Rea). Micrograph of the leaf surface of the Ni-hyperaccumulator Alyssum lesbiacum (Ute Kraemer). Arabidopsis halleri growing at the bottom of a heap of minewaste (Ute Kraemer)
Heavy metals and plants: from ecosystems to biomolecules is funded by the New Phytologist Trust

Last updated: February 18, 2003